|
@@ -4,7 +4,6 @@ format: html
|
|
editor: visual
|
|
editor: visual
|
|
---
|
|
---
|
|
|
|
|
|
-
|
|
|
|
# 1. Ice breaking
|
|
# 1. Ice breaking
|
|
|
|
|
|
Please tell your name, group and something you achieved this week.
|
|
Please tell your name, group and something you achieved this week.
|
|
@@ -12,53 +11,54 @@ Please tell your name, group and something you achieved this week.
|
|
> Julien Colomb, INF project, I recently register for my Aikido 3.Kyu exam .
|
|
> Julien Colomb, INF project, I recently register for my Aikido 3.Kyu exam .
|
|
|
|
|
|
# 2. Why GIN-Tonic
|
|
# 2. Why GIN-Tonic
|
|
-- Data science approach: work using code, work in a team, work online
|
|
|
|
-- Research project:
|
|
|
|
- - Git version control + project management tool
|
|
|
|
- - Research repository template
|
|
|
|
- - Special toolbox for many and large files
|
|
|
|
-- DMP: one text file to manage and share
|
|
|
|
|
|
+
|
|
|
|
+- Data science approach: work using code, work in a team, work online
|
|
|
|
+- Research project:
|
|
|
|
+ - Git version control + project management tool
|
|
|
|
+ - Research repository template
|
|
|
|
+ - Special toolbox for many and large files
|
|
|
|
+- DMP: one text file to manage and share
|
|
|
|
|
|
# 3. Getting a GIN account
|
|
# 3. Getting a GIN account
|
|
|
|
|
|
-- https://gindata.biologie.hu-berlin.de/user/sign_up
|
|
|
|
-- write username and group to the data manager (zoom chat/ email)
|
|
|
|
-- The data manager will add you to the organisation prepared for your team
|
|
|
|
-- https://gindata.biologie.hu-berlin.de >> sign in
|
|
|
|
|
|
+- https://gindata.biologie.hu-berlin.de/user/sign_up
|
|
|
|
+- write username and group to the data manager (zoom chat/ email)
|
|
|
|
+- The data manager will add you to the organisation prepared for your team
|
|
|
|
+- https://gindata.biologie.hu-berlin.de \>\> sign in
|
|
|
|
|
|
# 4. Create a new project
|
|
# 4. Create a new project
|
|
-- https://gindata.biologie.hu-berlin.de
|
|
|
|
-- `Access tonic functions` button at bottom
|
|
|
|
-- project creation
|
|
|
|
- - Click on figure "Project creation"
|
|
|
|
- - sign in
|
|
|
|
- - erase organisation if there is one
|
|
|
|
- - choose organisation (dropdown menu)
|
|
|
|
- - Write title (no space)
|
|
|
|
- - push `submit` button
|
|
|
|
|
|
|
|
|
|
+- https://gindata.biologie.hu-berlin.de
|
|
|
|
+- `Access tonic functions` button at bottom
|
|
|
|
+- project creation
|
|
|
|
+- Click on figure "Project creation" - sign in - erase organisation if there is one - choose organisation (dropdown menu) - Write title (no space) - push `submit` button
|
|
|
|
|
|
# 5. Upload and modify DMP file
|
|
# 5. Upload and modify DMP file
|
|
|
|
|
|
- click explore button, search for "INF"
|
|
- click explore button, search for "INF"
|
|
-- choose the "[**PRitter_lab / SFB1315_INF.06_dissemination**](https://gindata.biologie.hu-berlin.de/PRitter_lab/SFB1315_INF.06_dissemination)**"** repository (public repository)
|
|
|
|
-- >> `other` folder >> DMP_template.md
|
|
|
|
-- click `download`button
|
|
|
|
-- One person project:
|
|
|
|
- - go to your research repository
|
|
|
|
- - 01_project_management >> 05_data_management_plan >> click `upload file` button
|
|
|
|
- - choose DMP file and upload it.
|
|
|
|
- - Click the file, modify it,. save it pushing the `Commit Changes`button
|
|
|
|
|
|
|
|
-# 6. Some comments
|
|
|
|
|
|
+- choose the "[**PRitter_lab / SFB1315_INF.06_dissemination**](https://gindata.biologie.hu-berlin.de/PRitter_lab/SFB1315_INF.06_dissemination)**"** repository (public repository)
|
|
|
|
|
|
-- research project = multiple repositories.
|
|
|
|
- - many files is therefore possible
|
|
|
|
- - different sharing of content (organisation, access right, publication)
|
|
|
|
|
|
+-
|
|
|
|
|
|
|
|
+ > > `other` folder \>\> DMP_template.md
|
|
|
|
|
|
|
|
+- click `download`button
|
|
|
|
|
|
|
|
+- One person project:
|
|
|
|
|
|
|
|
+ - go to your research repository
|
|
|
|
+ - 01_project_management \>\> 05_data_management_plan \>\> click `upload file` button
|
|
|
|
+ - choose DMP file and upload it.
|
|
|
|
+ - Click the file, modify it,. save it pushing the `Commit Changes`button
|
|
|
|
|
|
|
|
+# 6. Some comments
|
|
|
|
|
|
|
|
+- research project = multiple repositories.
|
|
|
|
+ - many files is therefore possible
|
|
|
|
+ - different sharing of content (organisation, access right, publication)
|
|
|
|
+
|
|
|
|
+# 7. Next steps
|
|
|
|
|
|
|
|
+- Desktop version to work with (large) datasets
|
|
|
|
+- basics of datalad and git
|